Sequence analysis

• Sequence identification
  
• Microbial typing
  
• Cloned DNA re-sequencing
  
• mtDNA
  
• Transgenetics
  
• Expression profiling
  
• Oligo ID
  
• Microsatellite

Mutation detection

• Known positions
  
• Unknown positions within hot spots
  
• Point mutations
  
• Insertions/deletions
  
• Multiple mutations
  
• Multiplexing

• SNPs and DIPs
  - Di-, tri- and tetra allelic
  - Multiple
  - Multiplexing
  
• Haplotype
  - Out-of-phase
  - Allele-specific PCR

• Allele frequency assessment
  - SNP frequency
  - Tri/tetra allelic SNP frequency
  - Indel frequency
  
• CpG-methylation
  
• Gene copy number
  
• Loss of heterozygosity
  
• Polyploid genomes
  
• Expression analyses